rs456469 chr4:188623653 A>G
- Sequence
catgtactaaatttatctgatgac[A/G]tcgcaaaagaaataacctagtcac
- ASB in cell types
- HepG2 (hepatoblastoma)
- ASB for transcription factors
- ATF2_HUMAN ATF7_HUMAN CREB1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ATF2_HUMAN | -3.66 | 3.03 | 1.33 | 6.22 | Concordant | |||
| ATF7_HUMAN | -3.01 | 2.42 | 1.50 | n/a | n/a | |||
| CREB1_HUMAN | -2.51 | 2.24 | 1.50 | 6.91 | Concordant |
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Motif analysis
