rs4565028 chr4:176195628 T>C
- Sequence
tgggccttattgctggcggcgcgg[T/C]ctcgtggggcggggcggagtctta
- ASB in cell types
- K562 (myelogenous leukemia) LNCaP (prostate carcinoma)
- ASB for transcription factors
- HDAC1_HUMAN KDM1A_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| HDAC1_HUMAN | -0.35 | 1.85 | 2.00 | n/a | n/a | |||
| KDM1A_HUMAN | -1.18 | 1.66 | 2.00 | n/a | n/a |
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