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rs456551 chr22:18089340 T>A

Sequence
atggaactgagtaatcaggtgagc[T/A]ggaagggatgtggggggcggggca
ASB in cell types
GM12878 (female B-cells)
ASB for transcription factors
IKZF2_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (T) ASB
color scale alt
-log10 FDR of Alt (A) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
IKZF2_HUMAN -1.96 1.78 1.007.9·10-4 1.33 n/a n/a
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Motif analysis

No data available

Genetic associations

GRASP hdl cholesterol change with statins triglycerides
GTEx eQTL Adrenal_Gland Brain_Cerebellar_Hemisphere Brain_Cerebellum Cells_Cultured_fibroblasts Heart_Atrial_Appendage Muscle_Skeletal Skin_Sun_Exposed_Lower_leg Small_Intestine_Terminal_Ileum Thyroid

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