ADASTRA v1.6.10
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rs457008
chr5:81778836
C
>
T
Sequence
cagcaccattttcctggcccctta[C/T]gtgattcatggtttctcttaacta
ASB in cell types
K562 (myelogenous leukemia)
ASB for transcription factors
KDM1A_HUMAN
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Color scale
-log10 FDR of Ref (
C
) ASB
-log10 FDR of Alt (
T
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+6 others)
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Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
KDM1A_HUMAN
1.76
-0.68
0.03
0.85
2.00
n/a
n/a
Items per page:
5
1 – 1 of 1
Motif analysis
No data available
Genetic associations
GRASP
anorexia nervosa
,
irritible bowel syndrome
,
knee osteoarthritis
,
knee osteoarthritis (females)
,
knee osteoarthritis (males)
,
osteoarthritis (females)
,
osteoarthritis (males)
GTEx eQTL
Adipose_Subcutaneous
,
Artery_Aorta
,
Thyroid
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Generated by ADASTRA database
2020.06.22 v1.6.10 Soos
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SNP set annotation with ANANASTRA
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+/-100bp
log2-scale
log2(Alt/Ref motif p-value)