rs457529 chr22:22902993 A>C
- Sequence
aagaccacccaaggagggccagtt[A/C]cgtaggcctgctgggtacaaggcc
- ASB in cell types
- GM12878 (female B-cells)
- ASB for transcription factors
- FOXK2_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| FOXK2_HUMAN | 1.73 | -1.62 | 1.33 | n/a | n/a |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Adipose_Visceral_Omentum, Artery_Aorta, Colon_Transverse, Esophagus_Mucosa, Liver, Lung, Minor_Salivary_Gland, Spleen, Thyroid, Whole_Blood