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rs457846 chr6:5133006 A>T

Sequence
ggcagcaccagccactgcaggaca[A/T]agatgactagagaaggttcgcccg
ASB in cell types
GM12878 (female B-cells)

Color scale

color scale ref
-log10 FDR of Ref (A) ASB
color scale alt
-log10 FDR of Alt (T) ASB

Details

Cell type
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
GM12878 (female B-cells) 0.00 0.79 1.005.7·10-4 1.35
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Motif analysis

No data available

Genetic associations

GRASP total cholesterol
GTEx eQTL Adipose_Subcutaneous Artery_Aorta Artery_Tibial Cells_Cultured_fibroblasts Colon_Transverse Esophagus_Mucosa Esophagus_Muscularis Heart_Atrial_Appendage Heart_Left_Ventricle Lung Muscle_Skeletal Nerve_Tibial Skin_Not_Sun_Exposed_Suprapubic Thyroid

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