rs4599892 chr9:37603049 G>A
- Sequence
aggctgctgccaaatcccaggagg[G/A]tgtggactgtgtgcgagtgcagga
- ASB in cell types
- CWR22 (prostate carcinoma) SNU175 (adenocarcinoma)
- ASB for transcription factors
- ANDR_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ANDR_HUMAN | 1.00 | 0.39 | 1.52 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GRASP autism with high iq, comorbid depressive syndrome and alcohol dependence, diastolic blood pressure (dbp), fasting insulin, homa-b, homa-ir, infant head circumference
GTEx eQTL Adipose_Subcutaneous, Adipose_Visceral_Omentum, Adrenal_Gland, Artery_Aorta, Artery_Coronary, Artery_Tibial, Breast_Mammary_Tissue, Cells_Cultured_fibroblasts, Cells_EBV-transformed_lymphocytes, Colon_Sigmoid, Colon_Transverse, Esophagus_Mucosa, Esophagus_Muscularis, Liver, Lung, Muscle_Skeletal, Nerve_Tibial, Pancreas, Prostate, Skin_Not_Sun_Exposed_Suprapubic, Skin_Sun_Exposed_Lower_leg, Stomach, Thyroid