ADASTRA v1.6.10
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rs460574
chr21:38614321
T
>
C
Sequence
ttcttacaatgaatcccaatgttg[T/C]tcagggccacaatatcttcaggta
ASB in cell types
foreskin keratinocyte
ASB for transcription factors
CTCF_HUMAN
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Color scale
-log10 FDR of Ref (
T
) ASB
-log10 FDR of Alt (
C
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+6 others)
Selected columns
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Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
CTCF_HUMAN
0.07
2.17
1.00
3.2·10
-5
1.53
n/a
No Hit
Items per page:
5
1 – 1 of 1
Motif analysis
No data available
Genetic associations
GRASP
hdl cholesterol
,
ldl cholesterol
,
major depressive disorder
,
paternal transmission distortion
,
spine bone mineral density (bmd)
,
tetrology of fallot
GTEx eQTL
Esophagus_Mucosa
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Generated by ADASTRA database
2020.06.22 v1.6.10 Soos
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SNP set annotation with ANANASTRA
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+/-100bp
log2-scale
log2(Alt/Ref motif p-value)