ADASTRA v1.6.10
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rs461404
chr5:40799438
G
>
A
Sequence
atgcattaggcactgttttgttcc[G/A]aggaagatattgcaggagaagcaa
ASB in cell types
HEK293 (embryonic kidney)
K562 (myelogenous leukemia)
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View in UCSC Genome Browser
View in PheLiGe
Color scale
-log10 FDR of Ref (
G
) ASB
-log10 FDR of Alt (
A
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+4 others)
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Cell type
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
HEK293 (embryonic kidney)
-0.69
0.88
1.00
5.6·10
-8
2.83
K562 (myelogenous leukemia)
0.52
0.56
1.3·10
-3
1.7·10
-4
1.37
Items per page:
5
1 – 2 of 2
Motif analysis
No data available
Genetic associations
GRASP
eye color
,
total cholesterol change with statins
GTEx eQTL
Artery_Aorta
,
Artery_Tibial
,
Breast_Mammary_Tissue
,
Cells_Cultured_fibroblasts
,
Esophagus_Mucosa
,
Muscle_Skeletal
,
Nerve_Tibial
,
Skin_Not_Sun_Exposed_Suprapubic
,
Skin_Sun_Exposed_Lower_leg
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Generated by ADASTRA database
2020.06.22 v1.6.10 Soos
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SNP set annotation with ANANASTRA
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