ADASTRA v1.6.10
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rs462134
chr22:22935122
G
>
A
Sequence
ttccctgtgccttgggagatgcaa[G/A]gaaggagggtggctgcaaaggcct
ASB in cell types
GM12878 (female B-cells)
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe
Color scale
-log10 FDR of Ref (
G
) ASB
-log10 FDR of Alt (
A
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+4 others)
Selected columns
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Cell type
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
GM12878 (female B-cells)
0.45
0.61
0.19
0.04
1.27
Items per page:
5
1 – 1 of 1
Motif analysis
No data available
Genetic associations
GRASP
ldl cholesterol
,
mitral annular calcium
,
total cholesterol change with statins
,
triglycerides change with statins
GTEx eQTL
Adipose_Visceral_Omentum
,
Adrenal_Gland
,
Cells_Cultured_fibroblasts
,
Colon_Transverse
,
Esophagus_Mucosa
,
Lung
,
Spleen
,
Stomach
,
Whole_Blood
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Generated by ADASTRA database
2020.06.22 v1.6.10 Soos
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SNP set annotation with ANANASTRA
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+/-100bp
log2-scale