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rs4633 chr22:19962712 C>T

Sequence
caaggagcagcgcatcctgaacca[C/T]gtgctgcagcatgcggagcccggg
ASB in cell types
HEK293 (embryonic kidney) LHSAR (prostate epithelial cells)
ASB for transcription factors
ANDR_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (C) ASB
color scale alt
-log10 FDR of Alt (T) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
ANDR_HUMAN 0.27 0.73 1.005.5·10-4 1.74 n/a No Hit
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Motif analysis

No data available

Genetic associations

GRASP coronary artery disease (cad) irritible bowel syndrome major depressive disorder (broad definition) major depressive disorder (narrow definition) recurrent early onset major depressive disorder (broad definition) recurrent early onset major depressive disorder (narrow definition) serum creatinine simpson-angus scale systolic blood pressure (sbp) total cholesterol triglycerides
GTEx eQTL Artery_Aorta Cells_Cultured_fibroblasts Colon_Transverse Esophagus_Mucosa Nerve_Tibial Skin_Not_Sun_Exposed_Suprapubic Skin_Sun_Exposed_Lower_leg Small_Intestine_Terminal_Ileum Thyroid Whole_Blood

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