rs463420 chr20:54064544 A>G
- Sequence
gcctccagcttcccttcccccaga[A/G]ctggcgggcagggcaggctttcca
- ASB in cell types
- GM12878 (female B-cells) L1236 (Hodgkin lymphoma)
- ASB for transcription factors
- NFKB1_HUMAN IKZF2_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| NFKB1_HUMAN | -2.58 | 2.48 | 1.33 | n/a | No Hit | |||
| IKZF2_HUMAN | 1.51 | -1.19 | 1.50 | n/a | n/a |
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