rs463426 chr22:21454896 T>C
- Sequence
ttagtacaaaaggaagtgtcccca[T/C]gctaaatattccaagaaatgtttc
- ASB in cell types
- K562 (myelogenous leukemia)
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Cell type | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | |
|---|---|---|---|---|---|---|
| K562 (myelogenous leukemia) | 1.24 | -0.90 | 3.30 |
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Motif analysis
No data available
Genetic associations
GRASP biploar disorder (bipolar schizoaffective disorder), celiac disease, end-of-induction minimal residual disease (pediatric acute lymphoblastic leukemia treatment), hip bone mineral density (bmd), ldl cholesterol, partial epilepsy, rheumatoid arthritis, selective immunoglobulin a deficiency (igad), spine bone mineral density (bmd), sporadic creutzfeldt-jakob disease, systemic lupus erythematosus (sle), total cholesterol
GTEx eQTL Adipose_Subcutaneous, Adipose_Visceral_Omentum, Artery_Aorta, Artery_Tibial, Brain_Cerebellum, Breast_Mammary_Tissue, Cells_Cultured_fibroblasts, Colon_Sigmoid, Esophagus_Gastroesophageal_Junction, Esophagus_Mucosa, Esophagus_Muscularis, Lung, Muscle_Skeletal, Nerve_Tibial, Skin_Sun_Exposed_Lower_leg, Thyroid