rs463677 chr5:56270322 T>C
- Sequence
tctatcaaagggaccgcaagagag[T/C]atgcgcttcagatgatgaccagta
- ASB in cell types
- SH-SY5Y (neuroblastoma) foreskin keratinocyte
- ASB for transcription factors
- CTCF_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 0.51 | 0.94 | 1.67 | 2.33 | Concordant |
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Motif analysis
