rs4637560 chr5:43018246 T>C
- Sequence
ccacgtcctccagtgccggggtca[T/C]ggtcgcagcacccggcgttcccgt
- ASB in cell types
- HEK293 (embryonic kidney) A549 (lung carcinoma) HEK293T (embryonic kidney)
- ASB for transcription factors
- CTCF_HUMAN ZBT20_HUMAN MZF1_HUMAN FEZF1_HUMAN
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-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 0.30 | 1.24 | 1.44 | n/a | No Hit | |||
| ZBT20_HUMAN | n/a | 2.93 | 2.50 | n/a | n/a | |||
| MZF1_HUMAN | n/a | 2.69 | 2.00 | n/a | No Hit | |||
| FEZF1_HUMAN | -3.80 | 2.20 | 2.50 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Adipose_Subcutaneous, Breast_Mammary_Tissue, Cells_Cultured_fibroblasts, Colon_Sigmoid, Esophagus_Mucosa, Lung, Muscle_Skeletal, Nerve_Tibial, Stomach, Testis, Thyroid, Whole_Blood