rs464232 chr20:15158699 G>T
- Sequence
aatgaaaatctcatactcagttcc[G/T]gcaatattagtcattttcttgaag
- ASB in cell types
- HepG2 (hepatoblastoma)
- ASB for transcription factors
- FOXA2_HUMAN ETV5_HUMAN NR2F6_HUMAN BCL6_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| FOXA2_HUMAN | 1.96 | -1.64 | 1.33 | n/a | No Hit | |||
| ETV5_HUMAN | 2.15 | n/a | 1.50 | 3.57 | Discordant | |||
| NR2F6_HUMAN | 1.64 | -1.05 | 1.42 | n/a | n/a | |||
| BCL6_HUMAN | 1.84 | -1.42 | 1.50 | n/a | No Hit | |||
| SOX5_HUMAN | 1.83 | -1.46 | 1.33 | n/a | No Hit |
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Motif analysis
