ADASTRA v1.6.10
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rs464331
chr20:479010
T
>
A
Sequence
tgtaatttgctacagtgcaaaata[T/A]ctggctttccatagagggagtggg
ASB in cell types
HEK293 (embryonic kidney)
PC9 (lung adenocarcinoma)
HepG2 (hepatoblastoma)
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Color scale
-log10 FDR of Ref (
T
) ASB
-log10 FDR of Alt (
A
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+4 others)
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Cell type
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
HEK293 (embryonic kidney)
0.57
-0.12
1.3·10
-5
1.00
2.05
PC9 (lung adenocarcinoma)
-1.10
1.71
1.00
4.9·10
-3
2.00
HepG2 (hepatoblastoma)
0.47
0.55
0.80
7.2·10
-3
1.26
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Motif analysis
No data available
Genetic associations
GTEx eQTL
Skin_Not_Sun_Exposed_Suprapubic
,
Skin_Sun_Exposed_Lower_leg
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Generated by ADASTRA database
2020.06.22 v1.6.10 Soos
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SNP set annotation with ANANASTRA
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+/-100bp
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