rs464865 chr6:33289409 A>G
- Sequence
tttaaaaaagaaaggcaggtccgg[A/G]gccaggggctaagtagcggtgcgg
- ASB in cell types
- HepG2 (hepatoblastoma) lymphoblastoid cells
- ASB for transcription factors
- GABPA_HUMAN TYY1_HUMAN HLF_HUMAN CREM_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| GABPA_HUMAN | 1.94 | 0.61 | 1.99 | n/a | No Hit | |||
| TYY1_HUMAN | 1.11 | -0.10 | 1.25 | n/a | No Hit | |||
| HLF_HUMAN | 2.46 | n/a | 2.00 | n/a | No Hit | |||
| CREM_HUMAN | 2.14 | -3.10 | 2.00 | n/a | No Hit |
Items per page:
1 – 4 of 4
Motif analysis
No data available
Genetic associations
GTEx eQTL Adipose_Subcutaneous, Adipose_Visceral_Omentum, Adrenal_Gland, Artery_Aorta, Artery_Coronary, Artery_Tibial, Brain_Amygdala, Brain_Caudate_basal_ganglia, Brain_Cerebellar_Hemisphere, Brain_Cerebellum, Brain_Cortex, Brain_Hippocampus, Brain_Nucleus_accumbens_basal_ganglia, Brain_Putamen_basal_ganglia, Breast_Mammary_Tissue, Cells_Cultured_fibroblasts, Colon_Sigmoid, Esophagus_Mucosa, Esophagus_Muscularis, Heart_Atrial_Appendage, Heart_Left_Ventricle, Liver, Lung, Muscle_Skeletal, Nerve_Tibial, Pituitary, Skin_Not_Sun_Exposed_Suprapubic, Skin_Sun_Exposed_Lower_leg, Spleen, Testis, Thyroid, Whole_Blood