ADASTRA v1.6.10
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rs4653186
chr1:36397328
T
>
G
Sequence
cagcatcccgtccagggctgtgca[T/G]tgtggcactgagcgtggcaagcca
ASB in cell types
K562 (myelogenous leukemia)
MCF7 (Invasive ductal breast carcinoma)
GM12878 (female B-cells)
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Color scale
-log10 FDR of Ref (
T
) ASB
-log10 FDR of Alt (
G
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+4 others)
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Cell type
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
K562 (myelogenous leukemia)
0.44
0.52
3.5·10
-3
8.1·10
-5
1.32
MCF7 (Invasive ductal breast carcinoma)
1.05
-0.44
0.01
1.00
2.00
GM12878 (female B-cells)
0.40
0.59
0.32
0.04
1.32
Items per page:
5
1 – 3 of 3
Motif analysis
No data available
Genetic associations
GRASP
alzheimers disease with psychotic symptoms (alzheimers disease with psychotic symptoms v. alzheimers disease without psychotic symptoms)
,
alzheimers disease with psychotic symptoms (alzheimers disease with psychotic symptoms v. controls)
,
stabilized warfarin dose
,
systolic blood pressure (sbp)
GTEx eQTL
Esophagus_Mucosa
,
Esophagus_Muscularis
,
Heart_Atrial_Appendage
,
Nerve_Tibial
,
Skin_Not_Sun_Exposed_Suprapubic
,
Skin_Sun_Exposed_Lower_leg
,
Thyroid
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Generated by ADASTRA database
2020.06.22 v1.6.10 Soos
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SNP set annotation with ANANASTRA
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