rs4661865 chr1:16615375 C>T
- Sequence
caagcactttgggaggccaaggcc[C/T]gcagatcatttgagctcaggagtt
- ASB in cell types
- HEK293 (embryonic kidney) MCF7 (Invasive ductal breast carcinoma) HEK293T (embryonic kidney) HCT-116 (colon carcinoma)
- ASB for transcription factors
- ZFX_HUMAN ZBT17_HUMAN P53_HUMAN ZN394_HUMAN
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-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ZFX_HUMAN | 2.33 | -0.67 | 2.11 | 5.57 | Discordant | |||
| ZBT17_HUMAN | 2.38 | -2.62 | 1.33 | n/a | No Hit | |||
| P53_HUMAN | 1.86 | n/a | 2.50 | n/a | No Hit | |||
| ZN394_HUMAN | 2.22 | n/a | 2.00 | n/a | No Hit | |||
| ZN768_HUMAN | 2.41 | n/a | 2.00 | n/a | No Hit |
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Motif analysis
