rs4671630 chr2:64917558 A>C
- Sequence
cctggctacttcttggctgtgtga[A/C]cttaggcaaatttcttaacccttc
- ASB in cell types
- GM12878 (female B-cells)
- ASB for transcription factors
- IKZF1_HUMAN IKZF2_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| IKZF1_HUMAN | 2.12 | -2.20 | 1.33 | n/a | No Hit | |||
| IKZF2_HUMAN | 1.40 | -1.01 | 1.33 | n/a | n/a |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Brain_Caudate_basal_ganglia, Brain_Cerebellum, Cells_EBV-transformed_lymphocytes, Spleen, Testis