rs467644 chr21:19796585 T>C
- Sequence
atgttgctttctgtgttcacaacc[T/C]gttggtacagaccaaagaaaagtt
- ASB in cell types
- breast tumor tissue LHSAR (prostate epithelial cells)
- ASB for transcription factors
- PRGR_HUMAN FOXA1_HUMAN ANDR_HUMAN ESR1_HUMAN
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-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| PRGR_HUMAN | -2.17 | 2.25 | 2.00 | n/a | No Hit | |||
| FOXA1_HUMAN | -0.89 | 1.72 | 1.75 | n/a | No Hit | |||
| ANDR_HUMAN | 1.44 | 0.44 | 1.67 | n/a | No Hit | |||
| ESR1_HUMAN | -3.00 | 2.17 | 2.00 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GRASP advanced age-related macular degeneration (geographic atrophy), diastolic blood pressure (dbp), ldl cholesterol, prop taste detection threshold