ADASTRA v1.6.10
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adastra.autosome.org
rs4681
chr4:154569680
C
>
T
Sequence
ataccagatctcagtgaacaaata[C/T]agaggaacagccggtaatgccctc
ASB for transcription factors
FOXA1_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe
Color scale
-log10 FDR of Ref (
C
) ASB
-log10 FDR of Alt (
T
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+6 others)
Selected columns
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Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
FOXA1_HUMAN
1.21
-0.65
0.02
0.89
2.00
n/a
No Hit
Items per page:
5
1 – 1 of 1
Motif analysis
No data available
Genetic associations
GRASP
coronary artery disease (cad)
,
plasma fibrinogen
GTEx eQTL
Adrenal_Gland
,
Heart_Atrial_Appendage
,
Lung
,
Stomach
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Generated by ADASTRA database
2020.06.22 v1.6.10 Soos
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SNP set annotation with ANANASTRA
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+/-100bp
log2-scale
log2(Alt/Ref motif p-value)