rs4682994 chr3:44761638 G>A
- Sequence
gtaaagacagaagacaggttccgc[G/A]acggattcgcgacgatacagaggc
- ASB in cell types
- LNCaP (prostate carcinoma) liver
- ASB for transcription factors
- CREB1_HUMAN E2F1_HUMAN SP1_HUMAN TYY1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CREB1_HUMAN | 1.60 | -1.24 | 1.50 | n/a | No Hit | |||
| E2F1_HUMAN | 1.62 | 0.25 | 1.43 | n/a | No Hit | |||
| SP1_HUMAN | 1.84 | -1.73 | 1.33 | n/a | No Hit | |||
| TYY1_HUMAN | 1.81 | -1.46 | 1.33 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Adipose_Subcutaneous, Artery_Aorta, Brain_Cortex, Brain_Frontal_Cortex_BA9, Brain_Hypothalamus, Brain_Putamen_basal_ganglia, Cells_Cultured_fibroblasts, Heart_Atrial_Appendage, Muscle_Skeletal, Nerve_Tibial, Skin_Not_Sun_Exposed_Suprapubic, Skin_Sun_Exposed_Lower_leg, Testis, Thyroid, Whole_Blood