rs470086 chr22:43826559 C>T
- Sequence
cacaggcagccctggcccttccca[C/T]gccattatccactcacagctcaac
- ASB in cell types
- foreskin keratinocyte
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Cell type | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | |
|---|---|---|---|---|---|---|
| foreskin keratinocyte | 0.45 | n/a | 2.50 |
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Motif analysis
No data available
Genetic associations
GRASP aortic valve calcium, cystatin c in serum, diastolic blood pressure (dbp), hdl cholesterol, height, ldl cholesterol
GTEx eQTL Brain_Anterior_cingulate_cortex_BA24, Brain_Caudate_basal_ganglia, Brain_Cerebellum, Brain_Cortex, Brain_Frontal_Cortex_BA9, Brain_Hypothalamus, Brain_Nucleus_accumbens_basal_ganglia, Brain_Putamen_basal_ganglia, Cells_Cultured_fibroblasts, Nerve_Tibial, Spleen, Testis