rs471078 chr18:8696970 G>T
- Sequence
cctccgggacatcgcggctctctc[G/T]gggcaggagctgtctctttctcaa
- ASB in cell types
- foreskin keratinocyte erythroid progenitors neural cell
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-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Cell type | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | |
|---|---|---|---|---|---|---|
| foreskin keratinocyte | n/a | 0.48 | 2.50 | |||
| erythroid progenitors | n/a | 2.34 | 2.50 | |||
| neural cell | -0.39 | 0.79 | 1.00 |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Brain_Cerebellum, Brain_Cortex, Brain_Frontal_Cortex_BA9, Cells_Cultured_fibroblasts, Esophagus_Muscularis, Heart_Atrial_Appendage, Muscle_Skeletal, Nerve_Tibial, Thyroid