ADASTRA v1.6.10
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rs472076
chr1:153041266
G
>
T
Sequence
ggcatgagaggcattctcaaacta[G/T]gaaatatcctgttctgggatctcc
ASB in cell types
K562 (myelogenous leukemia)
foreskin keratinocyte
ASB for transcription factors
IKZF1_HUMAN
CTCF_HUMAN
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View in PheLiGe
Color scale
-log10 FDR of Ref (
G
) ASB
-log10 FDR of Alt (
T
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+6 others)
Selected columns
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Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
IKZF1_HUMAN
3.19
-3.00
5.7·10
-8
1.00
2.00
n/a
No Hit
CTCF_HUMAN
-1.48
1.45
1.00
0.02
2.00
n/a
No Hit
Items per page:
5
1 – 2 of 2
Motif analysis
No data available
Genetic associations
GRASP
fasting insulin
,
homa-ir
,
infant head circumference
,
parkinsons disease
,
urinary albumin-to-creatinine ratio
GTEx eQTL
Adipose_Visceral_Omentum
,
Esophagus_Mucosa
,
Ovary
,
Skin_Not_Sun_Exposed_Suprapubic
,
Skin_Sun_Exposed_Lower_leg
,
Testis
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Generated by ADASTRA database
2020.06.22 v1.6.10 Soos
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SNP set annotation with ANANASTRA
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+/-100bp
log2-scale
log2(Alt/Ref motif p-value)