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rs4723940 chr7:1060872 C>T

Sequence
tgcctgcgcggaaaccctggcatc[C/T]gatgaggaagtgatcacacaagcc
ASB in cell types
CD14+ monocytes periferal blood macrophages
ASB for transcription factors
STAT1_HUMAN SPI1_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (C) ASB
color scale alt
-log10 FDR of Alt (T) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
STAT1_HUMAN 2.25 n/a 1.7·10-41.00 2.50 n/a No Hit
SPI1_HUMAN 1.88 -1.93 9.0·10-41.00 2.00 -0.29 Weak Concordant
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Motif analysis

SPI1_HUMAN Weak Concordant
SPI1_HUMAN pic

Genetic associations

GRASP years of education
GTEx eQTL Adipose_Subcutaneous Artery_Aorta Artery_Tibial Esophagus_Gastroesophageal_Junction Esophagus_Mucosa Esophagus_Muscularis Muscle_Skeletal Nerve_Tibial Prostate Skin_Sun_Exposed_Lower_leg Spleen Testis Thyroid Whole_Blood

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