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rs4727479 chr7:101122386 G>C

Sequence
aagcggggaagacagaagcaaaga[G/C]gaagagcagagatcgggccagaag
ASB in cell types
A549 (lung carcinoma)
ASB for transcription factors
JUN_HUMAN ELF1_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
JUN_HUMAN 1.49 -0.90 4.1·10-31.00 2.00 n/a No Hit
ELF1_HUMAN 1.62 -1.88 9.2·10-31.00 1.33 -6.24 Concordant
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Motif analysis

ELF1_HUMAN Concordant
ELF1_HUMAN pic

Genetic associations

GRASP ankle brachial index birth weight triglycerides change with statins
GTEx eQTL Artery_Aorta Cells_Cultured_fibroblasts Esophagus_Mucosa

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