rs4727869 chr7:79461824 T>C
- Sequence
tactgaactcttagtacatgctac[T/C]ggaaccttttatcatgtttcttcc
- ASB in cell types
- HepG2 (hepatoblastoma)
- ASB for transcription factors
- CEBPA_HUMAN RARA_HUMAN BCL6_HUMAN RXRB_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CEBPA_HUMAN | n/a | 2.78 | 1.50 | n/a | No Hit | |||
| RARA_HUMAN | -3.38 | 2.75 | 1.33 | n/a | No Hit | |||
| BCL6_HUMAN | -3.32 | 2.82 | 1.50 | n/a | No Hit | |||
| RXRB_HUMAN | -2.26 | 2.42 | 1.33 | n/a | No Hit | |||
| CEBPG_HUMAN | -2.71 | 2.13 | 1.50 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Adrenal_Gland, Artery_Aorta, Artery_Tibial, Cells_Cultured_fibroblasts, Esophagus_Muscularis, Heart_Atrial_Appendage, Lung, Muscle_Skeletal, Whole_Blood