ADASTRA v1.6.10
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rs473213
chr11:95153642
T
>
C
Sequence
cttgcacatgaggaaactgaagca[T/C]agagagggtggttaacttagccaa
ASB in cell types
K562 (myelogenous leukemia)
CD34+ hematopoietic stem cells-derived proerythroblasts
GM12878 (female B-cells)
ASB for transcription factors
GATA1_HUMAN
NFXL1_HUMAN
DACH1_HUMAN
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Color scale
-log10 FDR of Ref (
T
) ASB
-log10 FDR of Alt (
C
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+6 others)
Selected columns
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Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
GATA1_HUMAN
-0.01
2.39
1.00
4.1·10
-8
1.81
n/a
No Hit
NFXL1_HUMAN
-3.38
2.47
1.00
6.7·10
-3
2.00
n/a
n/a
DACH1_HUMAN
-3.46
2.36
1.00
0.01
2.00
n/a
n/a
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Motif analysis
No data available
Genetic associations
GRASP
hdl cholesterol
,
serum creatinine
GTEx eQTL
Skin_Sun_Exposed_Lower_leg
,
Whole_Blood
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Generated by ADASTRA database
2020.06.22 v1.6.10 Soos
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SNP set annotation with ANANASTRA
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+/-100bp
log2-scale
log2(Alt/Ref motif p-value)