rs473542 chr2:126990879 G>A
- Sequence
gagaagtgacaagaggaaggaaaa[G/A]ggatttgggctttaggggcagtga
- ASB in cell types
- HepG2 (hepatoblastoma)
- ASB for transcription factors
- FOXA1_HUMAN FOXA3_HUMAN ETV5_HUMAN NFIL3_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| FOXA1_HUMAN | 1.74 | -1.43 | 2.00 | n/a | No Hit | |||
| FOXA3_HUMAN | 2.25 | -1.81 | 2.00 | n/a | No Hit | |||
| ETV5_HUMAN | 2.09 | n/a | 2.00 | -1.87 | Weak Concordant | |||
| NFIL3_HUMAN | 2.10 | -1.79 | 2.00 | n/a | n/a | |||
| FOXP1_HUMAN | 1.70 | -1.23 | 2.00 | n/a | No Hit |
Items per page:
1 – 5 of 6
Motif analysis
