rs474384 chr1:67701065 A>G
- Sequence
ggtttcaggataggcaagcaggat[A/G]ggagggcgggatcgggggtcttct
- ASB in cell types
- HepG2 (hepatoblastoma) K562 (myelogenous leukemia) pancreas heart left ventricle
- ASB for transcription factors
- CTCF_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 1.01 | 0.60 | 1.48 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GRASP 2 hour glucose, advanced age-related macular degeneration, advanced age-related macular degeneration (choroidal neovascularization) vs. no amd