rs4753480 chr11:93575874 A>G
- Sequence
caatgttgtgttaggattacataa[A/G]aggttctgagatccctatgtctgc
- ASB in cell types
- mesenchymal stem cells
- ASB for transcription factors
- CEBPB_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CEBPB_HUMAN | -0.50 | 2.26 | 1.33 | 1.12 | Weak Concordant |
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Motif analysis
Genetic associations
GRASP arthritis including non-rheumatoid, longstanding arthritis, partial epilepsy, refractive error
GTEx eQTL Adipose_Subcutaneous, Artery_Tibial, Brain_Caudate_basal_ganglia, Brain_Hippocampus, Cells_Cultured_fibroblasts, Esophagus_Mucosa, Muscle_Skeletal, Nerve_Tibial, Skin_Not_Sun_Exposed_Suprapubic, Testis, Thyroid, Whole_Blood