rs4757149 chr11:12066501 G>A
- Sequence
ttactcatcttttgttgttcttac[G/A]tattgggtggtaaatcttcacctg
- ASB in cell types
- A549 (lung carcinoma) SF268 (astrocytoma ) HT29 (colon adenocarcinoma)
- ASB for transcription factors
- TEAD1_HUMAN BCL3_HUMAN RAD21_HUMAN GCR_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| TEAD1_HUMAN | n/a | 2.72 | 2.50 | n/a | No Hit | |||
| BCL3_HUMAN | 1.39 | -1.10 | 2.00 | n/a | n/a | |||
| RAD21_HUMAN | 0.98 | -0.40 | 1.93 | n/a | n/a | |||
| GCR_HUMAN | 1.53 | -0.37 | 2.00 | n/a | No Hit | |||
| JUN_HUMAN | 1.26 | 0.33 | 1.92 | n/a | No Hit |
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