rs476632 chr6:44246588 C>T
- Sequence
gaaccctccgcccttcctctactc[C/T]tgcgagagtcgggatctggggcta
- ASB in cell types
- K562 (myelogenous leukemia)
- ASB for transcription factors
- HDAC1_HUMAN NRF1_HUMAN MNT_HUMAN SMCA4_HUMAN
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-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| HDAC1_HUMAN | 2.20 | -2.65 | 3.00 | n/a | n/a | |||
| NRF1_HUMAN | 1.52 | -1.47 | 3.00 | -1.29 | Weak Concordant | |||
| MNT_HUMAN | 2.15 | -3.48 | 3.00 | n/a | n/a | |||
| SMCA4_HUMAN | 1.85 | -0.61 | 3.00 | n/a | n/a |
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Motif analysis
