rs476635 chr4:83496395 T>G
- Sequence
gactttctcctcacctccctctgt[T/G]tccaagcggtcttatctgtgtttt
- ASB in cell types
- K562 (myelogenous leukemia)
- ASB for transcription factors
- IKZF1_HUMAN MNT_HUMAN NCOR1_HUMAN FOXK2_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| IKZF1_HUMAN | 0.66 | n/a | 2.00 | n/a | No Hit | |||
| MNT_HUMAN | 1.98 | -0.92 | 2.00 | n/a | n/a | |||
| NCOR1_HUMAN | 0.93 | -0.88 | 2.00 | n/a | n/a | |||
| FOXK2_HUMAN | 2.00 | -2.11 | 2.00 | n/a | n/a | |||
| HDAC2_HUMAN | 1.18 | -2.46 | 2.00 | n/a | n/a |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Brain_Cerebellar_Hemisphere, Brain_Frontal_Cortex_BA9, Cells_Cultured_fibroblasts, Muscle_Skeletal, Skin_Not_Sun_Exposed_Suprapubic, Skin_Sun_Exposed_Lower_leg, Testis