rs477242 chr6:124630488 T>G
- Sequence
gaatgaaaaagcaatatagagaat[T/G]atggccatggtaatgagcttaagt
- ASB in cell types
- D283 Med (medulloblastoma)
- ASB for transcription factors
- OTX2_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| OTX2_HUMAN | 1.27 | -0.64 | 1.33 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GRASP ldl cholesterol change with statins, rheumatoid arthritis, schizophrenia, spine bone mineral density (bmd), sporadic creutzfeldt-jakob disease, total cholesterol change with statins, urinary albumin-to-creatinine ratio