rs477947 chr2:45643755 G>C
- Sequence
ccccaggctggtccggggctgagc[G/C]gggcaccacagggagcggagacag
- ASB in cell types
- K562 (myelogenous leukemia) MCF7 (Invasive ductal breast carcinoma) A549 (lung carcinoma) GM12878 (female B-cells)
- ASB for transcription factors
- SMC3_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| SMC3_HUMAN | 0.50 | 0.20 | 1.10 | n/a | n/a |
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