rs4782346 chr16:88755687 C>G
- Sequence
gctttgcttataccgccttttcac[C/G]gaacggtggcgcctaccctcaaag
- ASB in cell types
- esophagus squamous epithelium LNCaP (prostate carcinoma) MCF7 (Invasive ductal breast carcinoma)
- ASB for transcription factors
- CTCF_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 2.05 | -0.82 | 2.03 | -3.86 | Concordant |
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Motif analysis
