rs479474 chr20:49278660 C>T
- Sequence
ttcgttctttcgcgtctgcggtgc[C/T]cggagtgtggtacttctcctagtt
- ASB in cell types
- HepG2 (hepatoblastoma) GM12878 (female B-cells) monocyte-derived macrophages tibial nerve
- ASB for transcription factors
- FOXK2_HUMAN MAF_HUMAN TF65_HUMAN CTCF_HUMAN
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-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| FOXK2_HUMAN | -0.32 | 2.30 | 1.42 | n/a | n/a | |||
| MAF_HUMAN | n/a | 2.75 | 2.50 | n/a | No Hit | |||
| TF65_HUMAN | -0.18 | 2.78 | 1.94 | n/a | No Hit | |||
| CTCF_HUMAN | 2.38 | 1.03 | 1.43 | n/a | No Hit | |||
| NRF1_HUMAN | -0.91 | 1.23 | 1.33 | n/a | No Hit |
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