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rs479862 chr1:69382311 T>C

Sequence
aggtttaatggacttacagttcca[T/C]gtggctggaaaggccccacaatca
ASB in cell types
GM12878 (female B-cells)
ASB for transcription factors
IKZF1_HUMAN IKZF2_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (T) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
IKZF1_HUMAN 2.28 -1.34 2.7·10-51.00 1.33 n/a No Hit
IKZF2_HUMAN 1.57 -0.86 0.021.00 1.33 n/a n/a
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Motif analysis

No data available

Genetic associations

GTEx eQTL Muscle_Skeletal Nerve_Tibial

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