rs480414 chr1:85461780 G>A
- Sequence
acataatagtgggagatacagaac[G/A]gtaaacaggcaattatcacgtggt
- ASB in cell types
- LNCaP (prostate carcinoma)
- ASB for transcription factors
- FOXA1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| FOXA1_HUMAN | -0.32 | 1.42 | 1.59 | 1.77 | Weak Concordant |
Items per page:
1 – 1 of 1
Motif analysis
Genetic associations
GRASP advanced age-related macular degeneration (geographic atrophy), diastolic blood pressure (dbp), hdl cholesterol, hypertension, maternal transmission distortion, salmonella-induced pyroptosis, systolic blood pressure (sbp)