rs4810590 chr20:47030043 A>G
- Sequence
gtagattgaaaacagccatagtca[A/G]tacgacaacgaatgggcaaggctg
- ASB in cell types
- LNCaP (prostate carcinoma) CWR22 (prostate carcinoma) MCF7 (Invasive ductal breast carcinoma)
- ASB for transcription factors
- FOXA1_HUMAN ANDR_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| FOXA1_HUMAN | 1.57 | 0.16 | 1.81 | -4.51 | Concordant | |||
| ANDR_HUMAN | 1.30 | 0.03 | 1.43 | n/a | No Hit |
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Motif analysis
