rs4810642 chr20:47464955 C>T
- Sequence
tctgagagcagggatcatgtgcta[C/T]acattttcttaatcttcgataatg
- ASB in cell types
- K562 (myelogenous leukemia) HEK293 (embryonic kidney)
- ASB for transcription factors
- ATF4_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ATF4_HUMAN | 2.21 | -3.09 | 2.00 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GRASP aortic valve calcium, fasting blood glucose, ldl cholesterol, ldl cholesterol change with statins, major depressive disorder (broad definition), major depressive disorder (broad definition) (females), total cholesterol, total cholesterol change with statins