rs481298 chr1:201461308 A>G
- Sequence
caatcacaaggcagtgtgactaat[A/G]gaggaggtatggcagcacagagag
- ASB in cell types
- MCF7 (Invasive ductal breast carcinoma) A549 (lung carcinoma) VCaP (prostate carcinoma) HT29 (colon adenocarcinoma)
- ASB for transcription factors
- FOXA1_HUMAN GRHL2_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| FOXA1_HUMAN | 0.60 | 1.03 | 2.17 | n/a | No Hit | |||
| GRHL2_HUMAN | -0.25 | 1.39 | 1.80 | n/a | No Hit |
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