rs482486 chr11:61043603 T>C
- Sequence
attgtactttgttcaggttaacaa[T/C]tggacccattgcttcaaatgtaga
- ASB in cell types
- GM12878 (female B-cells)
- ASB for transcription factors
- ZBT40_HUMAN IKZF2_HUMAN IKZF1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ZBT40_HUMAN | -2.54 | 2.35 | 1.00 | n/a | n/a | |||
| IKZF2_HUMAN | -1.38 | 1.79 | 1.33 | n/a | n/a | |||
| IKZF1_HUMAN | n/a | 2.02 | 1.33 | n/a | No Hit |
Items per page:
1 – 3 of 3
Motif analysis
No data available
Genetic associations
GTEx eQTL Brain_Anterior_cingulate_cortex_BA24, Brain_Cerebellar_Hemisphere, Brain_Cortex, Brain_Frontal_Cortex_BA9, Esophagus_Mucosa