rs483137 chr16:1103058 C>T
- Sequence
ccgccccgtcctgctccgggcagc[C/T]ccgcgggtgagctgggtgcgcgct
- ASB in cell types
- A549 (lung carcinoma) HEK293 (embryonic kidney) 786-O (renal carcinoma) HEK293T (embryonic kidney)
- ASB for transcription factors
- SMC3_HUMAN ZBT26_HUMAN RAD21_HUMAN ZN335_HUMAN
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-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| SMC3_HUMAN | -0.39 | 1.51 | 1.78 | n/a | n/a | |||
| ZBT26_HUMAN | 1.07 | n/a | 2.00 | n/a | n/a | |||
| RAD21_HUMAN | -0.11 | 1.41 | 1.84 | n/a | n/a | |||
| ZN335_HUMAN | 2.41 | n/a | 2.00 | n/a | No Hit | |||
| CTCF_HUMAN | 0.56 | 0.78 | 1.53 | n/a | No Hit |
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