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rs483536 chr6:44268116 T>A

Sequence
tttattcatacagaggctgaattt[T/A]aggaaaaacccacttaacccagcc
ASB in cell types
keratinocytes foreskin keratinocyte
ASB for transcription factors
SNAI2_HUMAN CTCF_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (T) ASB
color scale alt
-log10 FDR of Alt (A) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
SNAI2_HUMAN -3.42 3.60 1.001.8·10-13 1.50 n/a No Hit
CTCF_HUMAN 0.48 0.59 0.990.02 1.37 n/a No Hit
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Motif analysis

No data available

Genetic associations

GRASP hdl cholesterol
GTEx eQTL Adipose_Subcutaneous Heart_Atrial_Appendage Heart_Left_Ventricle Thyroid

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