rs4845436 chr1:152451483 T>C
- Sequence
ctgctggccacgggctaaaggtgg[T/C]gccttgaactgtgctcaggtccac
- ASB in cell types
- MCF7 (Invasive ductal breast carcinoma) LNCaP (prostate carcinoma) esophagus squamous epithelium NB69 (neuroblastoma)
- ASB for transcription factors
- CTCF_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 1.34 | 0.84 | 1.83 | 2.38 | Discordant |
Items per page:
1 – 1 of 1
Motif analysis
